Publications

Below is a list of selected peer-reviewed publications from our lab. For a complete, up-to-date list visit our Google Scholar profile →

Selected Publications

De Los Santos-Hernández, M., Montero-Hernández, S., Orihuela-Espina, F. & Sucar, L.E. CausalMorph: Preconditioning data for linear non-Gaussian acyclic models. Knowledge-Based Systems, 341, article 115773. → DOI
Orihuela-Espina, F. & Ward, R. Overprocessing in neuroimaging processing pipelines, illustrated with functional near-infrared spectroscopy (fNIRS). Journal of Ambient Intelligence and Humanized Computing, 17(3), pp. 807–827. → DOI
Waddell, A., Korzepa, M., Belfield, A.E., Fry, B., Mesquita, R.C., Smith, D., Quinlan, J. & Breen, L. Musculoskeletal and physiological responses to vortex wave stimulation in older adults. The Journal of Physiology. → DOI
Ward, R.J., Rodriguez-Gomez, G. & Orihuela-Espina, F. Full Model Optimisation of the Processing Pipeline in Functional Near-Infrared Spectroscopy. Neuroinformatics, 24(2), article 20. → DOI

Cao, J., Montero-Hernandez, S., Mesquita, R.C., Eggebrecht, A.T. & Dehghani, H. NIRFASTerFF: an accessible, cross-platform Python package for fast photon modeling. Journal of Biomedical Optics, 30(11), article 115001. → DOI
Ward, R.J. & Orihuela-Espina, F. Crust & Crumb sampling: efficient sampling design for high dimensional parameter recovery. Measurement Science and Technology, 36(6), article 065410. → DOI

Kazazian, K., Abdalmalak, A., Novi, S. L., Norton, L., Moulavi-Ardakani, R., Kolisnyk, M., Gofton, T. E., Mesquita, R. C., Owen, A. M. & Debicki, D. B. Functional near-infrared spectroscopy: A novel tool for detecting consciousness after acute severe brain injury. PNAS, 121(36), e2402723121. → DOI
Cao, J., Gorecki, J., Dale, R., Redwood-Sawyerr, C., Kontoravdi, C., Polizzi, K., Rowlands, C.J. & Dehghani, H. Fluorescence diffuse optical monitoring of bioreactors: a hybrid deep learning and model-based approach for tomography. Biomedical Optics Express, 15(9), 5009–5024. → DOI
Qin, Y., Wu, J., Bulger, E., Cao, J., Dehghani, H., Shinn-Cunningham, B. & Kainerstorfer, J.M. Optimizing spatial accuracy in electroencephalography reconstruction through diffuse optical tomography priors in the auditory cortex. Biomedical Optics Express, 15(8), 4859–4876. → DOI
Dale, R., Zheng, B., Orihuela-Espina, F., Ross, N., O’Sullivan, T.D., Howard, S. & Dehghani, H. Deep learning-enabled high-speed, multi-parameter diffuse optical tomography. Journal of Biomedical Optics, 29(7), 076004. → DOI